WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48C3A.7.1 Sequence Name  Y48C3A.7.1
Length (nt)  2631   Chromosome Location  II: 13311413-13320911
Chromosome . Primary Identifier  II Chromosome Location . Start  13311413
Chromosome Location . End  13320911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003119 mac-1 Y48C3A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48C3A.7 Y48C3A.7 2442   II: 13311600-13311749

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48C3A.7.1 13311413 13320911 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73132   337   II: 13311413-13311749 Caenorhabditis elegans
Exon73133   67   II: 13312541-13312607 Caenorhabditis elegans
Exon73134   184   II: 13312660-13312843 Caenorhabditis elegans
Exon73135   1038   II: 13313854-13314891 Caenorhabditis elegans
Exon73136   671   II: 13316491-13317161 Caenorhabditis elegans
Exon73137   201   II: 13319019-13319219 Caenorhabditis elegans
Exon73138   133   II: 13320779-13320911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48C3A.7.1 13311413 13320911 -1

1 Sequence

Length
2631

1 Sequence Ontology Term

Identifier Name Description
transcript