WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48C3A.8a Sequence Name  Y48C3A.8a
Length (nt)  1368   Chromosome Location  II: 13322537-13322596
Chromosome . Primary Identifier  II Chromosome Location . Start  13322537
Chromosome Location . End  13322596
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43420 SAM-10, isoform a 46.0 455 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00056905
WBRNAi00056906
WBRNAi00020745
WBRNAi00020746
WBRNAi00037249
WBRNAi00064331

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48C3A.8a 13322537 13322596 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012990 sam-10 Y48C3A.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48C3A.8a 13322537 13322596 -1
CDS:Y48C3A.8a 13324986 13325683 -1
CDS:Y48C3A.8a 13326534 13326795 -1
CDS:Y48C3A.8a 13329374 13329409 -1
CDS:Y48C3A.8a 13329471 13329717 -1
CDS:Y48C3A.8a 13330461 13330525 -1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48C3A.8a.1 Y48C3A.8a.1 2881   II: 13321024-13330525