WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48C3A.20 Sequence Name  Y48C3A.20
Length (nt)  1410   Chromosome Location  II: 13369607-13369750
Chromosome . Primary Identifier  II Chromosome Location . Start  13369607
Chromosome Location . End  13369750
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.20

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53771 Y48C3A.20 53.8 469 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056899
WBRNAi00037244

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48C3A.20 13369607 13369750 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012998 Y48C3A.20 Y48C3A.20 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48C3A.20 13369607 13369750 1
CDS:Y48C3A.20 13369798 13369892 1
CDS:Y48C3A.20 13369955 13370057 1
CDS:Y48C3A.20 13370542 13370765 1
CDS:Y48C3A.20 13371934 13372093 1
CDS:Y48C3A.20 13373600 13373885 1
CDS:Y48C3A.20 13374710 13375107 1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48C3A.20.1 Y48C3A.20.1 2599   II: 13369607-13376296