WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48C3A.16 Sequence Name  Y48C3A.16
Length (nt)  381   Chromosome Location  II: 13402980-13403249
Chromosome . Primary Identifier  II Chromosome Location . Start  13402980
Chromosome Location . End  13403249
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.16

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22150 PINN-4 13.3 126 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00056896
WBRNAi00037240
WBRNAi00111987
WBRNAi00111993
WBRNAi00111991
WBRNAi00092996
WBRNAi00111989

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48C3A.16 13402980 13403249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012996 pinn-4 Y48C3A.16 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48C3A.16 13402980 13403249 1
CDS:Y48C3A.16 13404443 13404553 1

1 Sequence

Length
381

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48C3A.16.1 Y48C3A.16.1 442   II: 13402980-13404614