WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48E1C.1a Sequence Name  Y48E1C.1a
Length (nt)  1344   Chromosome Location  II: 13415029-13415086
Chromosome . Primary Identifier  II Chromosome Location . Start  13415029
Chromosome Location . End  13415086
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1C.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25310 Y48E1C.1, isoform a 49.3 447 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056926
WBRNAi00037258

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48E1C.1a 13415029 13415086 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013014 Y48E1C.1 Y48E1C.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48E1C.1a 13415029 13415086 1
CDS:Y48E1C.1a 13415857 13415909 1
CDS:Y48E1C.1a 13419014 13419259 1
CDS:Y48E1C.1a 13420328 13420834 1
CDS:Y48E1C.1a 13422219 13422338 1
CDS:Y48E1C.1a 13422394 13422505 1
CDS:Y48E1C.1a 13422556 13422691 1
CDS:Y48E1C.1a 13424245 13424356 1

1 Sequence

Length
1344

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48E1C.1a.1 Y48E1C.1a.1 1437   II: 13415026-13424446