WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01G4.1a.1 Sequence Name  E01G4.1a.1
Length (nt)  2755   Chromosome Location  II: 13436923-13447593
Chromosome . Primary Identifier  II Chromosome Location . Start  13436923
Chromosome Location . End  13447593 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01G4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008444 tbc-14 E01G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01G4.1a E01G4.1a 1887   II: 13437762-13437956

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01G4.1a.1 13436923 13447593 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73303   1034   II: 13436923-13437956 Caenorhabditis elegans
Exon73305   215   II: 13439010-13439224 Caenorhabditis elegans
Exon73307   318   II: 13440592-13440909 Caenorhabditis elegans
Exon73309   262   II: 13443208-13443469 Caenorhabditis elegans
Exon73312   282   II: 13444692-13444973 Caenorhabditis elegans
Exon73314   227   II: 13445024-13445250 Caenorhabditis elegans
Exon73316   280   II: 13446389-13446668 Caenorhabditis elegans
Exon73318   137   II: 13447457-13447593 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01G4.1a.1 13436923 13447593 -1

1 Sequence

Length
2755

1 Sequence Ontology Term

Identifier Name Description
transcript