WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F11.3.1 Sequence Name  F54F11.3.1
Length (nt)  1186   Chromosome Location  II: 13517900-13522989
Chromosome . Primary Identifier  II Chromosome Location . Start  13517900
Chromosome Location . End  13522989 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010071 sre-45 F54F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F11.3 F54F11.3 1110   II: 13517912-13518206

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F11.3.1 13517900 13522989 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73431   307   II: 13517900-13518206 Caenorhabditis elegans
Exon73432   341   II: 13519218-13519558 Caenorhabditis elegans
Exon73433   257   II: 13520853-13521109 Caenorhabditis elegans
Exon73435   281   II: 13522709-13522989 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F11.3.1 13517900 13522989 1

1 Sequence

Length
1186

1 Sequence Ontology Term

Identifier Name Description
transcript