WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48E1B.14.1 Sequence Name  Y48E1B.14.1
Length (nt)  3113   Chromosome Location  II: 13522939-13531218
Chromosome . Primary Identifier  II Chromosome Location . Start  13522939
Chromosome Location . End  13531218 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013011 snx-14 Y48E1B.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48E1B.14 Y48E1B.14 2916   II: 13523113-13523292

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.14.1 13522939 13531218 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73436   354   II: 13522939-13523292 Caenorhabditis elegans
Exon73437   298   II: 13525417-13525714 Caenorhabditis elegans
Exon73438   1085   II: 13526639-13527723 Caenorhabditis elegans
Exon73440   165   II: 13527913-13528077 Caenorhabditis elegans
Exon73441   216   II: 13528136-13528351 Caenorhabditis elegans
Exon73442   523   II: 13529028-13529550 Caenorhabditis elegans
Exon73443   348   II: 13530685-13531032 Caenorhabditis elegans
Exon73444   124   II: 13531095-13531218 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.14.1 13522939 13531218 -1

1 Sequence

Length
3113

1 Sequence Ontology Term

Identifier Name Description
transcript