WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48E1B.2a.1 Sequence Name  Y48E1B.2a.1
Length (nt)  2906   Chromosome Location  II: 13533486-13540991
Chromosome . Primary Identifier  II Chromosome Location . Start  13533486
Chromosome Location . End  13540991 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013001 noa-1 Y48E1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48E1B.2a Y48E1B.2a 2364   II: 13533632-13533845

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.2a.1 13533486 13540991 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73445   360   II: 13533486-13533845 Caenorhabditis elegans
Exon73447   809   II: 13535137-13535945 Caenorhabditis elegans
Exon73449   97   II: 13536780-13536876 Caenorhabditis elegans
Exon73451   150   II: 13536962-13537111 Caenorhabditis elegans
Exon73453   1320   II: 13538903-13540222 Caenorhabditis elegans
Exon73455   170   II: 13540822-13540991 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.2a.1 13533486 13540991 -1

1 Sequence

Length
2906

1 Sequence Ontology Term

Identifier Name Description
transcript