WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48E1B.8.1 Sequence Name  Y48E1B.8.1
Length (nt)  1233   Chromosome Location  II: 13585705-13589038
Chromosome . Primary Identifier  II Chromosome Location . Start  13585705
Chromosome Location . End  13589038 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013007 Y48E1B.8 Y48E1B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48E1B.8 Y48E1B.8 1152   II: 13585755-13586174

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.8.1 13585705 13589038 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73497   470   II: 13585705-13586174 Caenorhabditis elegans
Exon73498   80   II: 13587169-13587248 Caenorhabditis elegans
Exon73499   300   II: 13587417-13587716 Caenorhabditis elegans
Exon73500   157   II: 13588609-13588765 Caenorhabditis elegans
Exon73502   226   II: 13588813-13589038 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.8.1 13585705 13589038 1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
transcript