WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31C9.6.1 Sequence Name  C31C9.6.1
Length (nt)  2856   Chromosome Location  II: 13655837-13662090
Chromosome . Primary Identifier  II Chromosome Location . Start  13655837
Chromosome Location . End  13662090 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31C9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007840 C31C9.6 C31C9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31C9.6 C31C9.6 2799   II: 13655885-13656130

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31C9.6.1 13655837 13662090 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73627   294   II: 13655837-13656130 Caenorhabditis elegans
Exon73628   303   II: 13656191-13656493 Caenorhabditis elegans
Exon73629   158   II: 13656634-13656791 Caenorhabditis elegans
Exon73630   204   II: 13656835-13657038 Caenorhabditis elegans
Exon73631   283   II: 13659235-13659517 Caenorhabditis elegans
Exon73632   500   II: 13659563-13660062 Caenorhabditis elegans
Exon73633   349   II: 13660389-13660737 Caenorhabditis elegans
Exon73634   150   II: 13660833-13660982 Caenorhabditis elegans
Exon73635   206   II: 13661030-13661235 Caenorhabditis elegans
Exon73636   134   II: 13661346-13661479 Caenorhabditis elegans
Exon73637   92   II: 13661525-13661616 Caenorhabditis elegans
Exon73638   93   II: 13661864-13661956 Caenorhabditis elegans
Exon73639   90   II: 13662001-13662090 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31C9.6.1 13655837 13662090 -1

1 Sequence

Length
2856

1 Sequence Ontology Term

Identifier Name Description
transcript