WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07G1.3.1 Sequence Name  W07G1.3.1
Length (nt)  1187   Chromosome Location  II: 13951906-13957457
Chromosome . Primary Identifier  II Chromosome Location . Start  13951906
Chromosome Location . End  13957457 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07G1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012330 zip-3 W07G1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07G1.3 W07G1.3 924   II: 13952068-13952373

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07G1.3.1 13951906 13957457 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73968   468   II: 13951906-13952373 Caenorhabditis elegans
Exon73969   143   II: 13952420-13952562 Caenorhabditis elegans
Exon73971   211   II: 13953203-13953413 Caenorhabditis elegans
Exon73973   173   II: 13953994-13954166 Caenorhabditis elegans
Exon73975   117   II: 13955874-13955990 Caenorhabditis elegans
Exon73977   75   II: 13957383-13957457 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07G1.3.1 13951906 13957457 -1

1 Sequence

Length
1187

1 Sequence Ontology Term

Identifier Name Description
transcript