WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07G1.5b.1 Sequence Name  W07G1.5b.1
Length (nt)  1508   Chromosome Location  II: 13959123-13962419
Chromosome . Primary Identifier  II Chromosome Location . Start  13959123
Chromosome Location . End  13962419 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07G1.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012332 rpi-1 W07G1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07G1.5b W07G1.5b 1353   II: 13959239-13959293

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07G1.5b.1 13959123 13962419 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73978   171   II: 13959123-13959293 Caenorhabditis elegans
Exon73981   246   II: 13960884-13961129 Caenorhabditis elegans
Exon73982   752   II: 13961230-13961981 Caenorhabditis elegans
Exon73985   147   II: 13962031-13962177 Caenorhabditis elegans
Exon73987   192   II: 13962228-13962419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07G1.5b.1 13959123 13962419 -1

1 Sequence

Length
1508

1 Sequence Ontology Term

Identifier Name Description
transcript