WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G8B.1b.1 Sequence Name  Y39G8B.1b.1
Length (nt)  1016   Chromosome Location  II: 13970580-13972946
Chromosome . Primary Identifier  II Chromosome Location . Start  13970580
Chromosome Location . End  13972946 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G8B.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012722 Y39G8B.1 Y39G8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G8B.1b Y39G8B.1b 951   II: 13970642-13970793

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8B.1b.1 13970580 13972946 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74006   214   II: 13970580-13970793 Caenorhabditis elegans
Exon74011   73   II: 13971323-13971395 Caenorhabditis elegans
Exon74014   519   II: 13972156-13972674 Caenorhabditis elegans
Exon74017   210   II: 13972737-13972946 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8B.1b.1 13970580 13972946 -1

1 Sequence

Length
1016

1 Sequence Ontology Term

Identifier Name Description
transcript