WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G8B.1a Sequence Name  Y39G8B.1a
Length (nt)  951   Chromosome Location  II: 13970911-13971062
Chromosome . Primary Identifier  II Chromosome Location . Start  13970911
Chromosome Location . End  13971062
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G8B.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21733 Y39G8B.1, isoform a 35.2 316 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00002078
WBRNAi00056283
WBRNAi00020416
WBRNAi00036955
WBRNAi00092613

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G8B.1a 13970911 13971062 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012722 Y39G8B.1 Y39G8B.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G8B.1a 13970911 13971062 -1
CDS:Y39G8B.1a 13971323 13971395 -1
CDS:Y39G8B.1a 13972156 13972674 -1
CDS:Y39G8B.1a 13972737 13972943 -1

1 Sequence

Length
951

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G8B.1a.2 Y39G8B.1a.2 1071   II: 13970794-13972946
Transcript:Y39G8B.1a.1 Y39G8B.1a.1 1141   II: 13970794-13973812