WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G8B.3.1 Sequence Name  Y39G8B.3.1
Length (nt)  1116   Chromosome Location  II: 13977164-13979883
Chromosome . Primary Identifier  II Chromosome Location . Start  13977164
Chromosome Location . End  13979883 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G8B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012724 sre-48 Y39G8B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G8B.3 Y39G8B.3 1116   II: 13977164-13977625

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8B.3.1 13977164 13979883 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74024   462   II: 13977164-13977625 Caenorhabditis elegans
Exon74025   359   II: 13978512-13978870 Caenorhabditis elegans
Exon74026   295   II: 13979589-13979883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8B.3.1 13977164 13979883 -1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
transcript