WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G8B.10.1 Sequence Name  Y39G8B.10.1
Length (nt)  594   Chromosome Location  II: 13982048-13983115
Chromosome . Primary Identifier  II Chromosome Location . Start  13982048
Chromosome Location . End  13983115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G8B.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012729 Y39G8B.10 Y39G8B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G8B.10 Y39G8B.10 423   II: 13982113-13982269

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8B.10.1 13982048 13983115 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74029   222   II: 13982048-13982269 Caenorhabditis elegans
Exon74030   186   II: 13982702-13982887 Caenorhabditis elegans
Exon74031   186   II: 13982930-13983115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8B.10.1 13982048 13983115 -1

1 Sequence

Length
594

1 Sequence Ontology Term

Identifier Name Description
transcript