WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03H9.4a.1 Sequence Name  W03H9.4a.1
Length (nt)  2260   Chromosome Location  II: 14133320-14142148
Chromosome . Primary Identifier  II Chromosome Location . Start  14133320
Chromosome Location . End  14142148 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03H9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012230 cacn-1 W03H9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03H9.4a W03H9.4a 1974   II: 14133584-14133820

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03H9.4a.1 14133320 14142148 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74244   501   II: 14133320-14133820 Caenorhabditis elegans
Exon74248   382   II: 14134992-14135373 Caenorhabditis elegans
Exon74251   458   II: 14136277-14136734 Caenorhabditis elegans
Exon74255   200   II: 14140153-14140352 Caenorhabditis elegans
Exon74256   314   II: 14141291-14141604 Caenorhabditis elegans
Exon74257   348   II: 14141692-14142039 Caenorhabditis elegans
Exon74258   57   II: 14142092-14142148 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03H9.4a.1 14133320 14142148 -1

1 Sequence

Length
2260

1 Sequence Ontology Term

Identifier Name Description
transcript