WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.4.1 Sequence Name  Y48B6A.4.1
Length (nt)  1609   Chromosome Location  II: 14166878-14171658
Chromosome . Primary Identifier  II Chromosome Location . Start  14166878
Chromosome Location . End  14171658 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.4 Y48B6A.4 1425   II: 14166888-14167067

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.4.1 14166878 14171658 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74288   190   II: 14166878-14167067 Caenorhabditis elegans
Exon74289   243   II: 14168423-14168665 Caenorhabditis elegans
Exon74290   197   II: 14168971-14169167 Caenorhabditis elegans
Exon74291   307   II: 14169770-14170076 Caenorhabditis elegans
Exon74292   394   II: 14170634-14171027 Caenorhabditis elegans
Exon74293   278   II: 14171381-14171658 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.4.1 14166878 14171658 -1

1 Sequence

Length
1609

1 Sequence Ontology Term

Identifier Name Description
transcript