WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.7.1 Sequence Name  Y48B6A.7.1
Length (nt)  2065   Chromosome Location  II: 14198046-14205460
Chromosome . Primary Identifier  II Chromosome Location . Start  14198046
Chromosome Location . End  14205460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000038 ace-4 Y48B6A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.7 Y48B6A.7 1809   II: 14198167-14198217

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.7.1 14198046 14205460 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74326   172   II: 14198046-14198217 Caenorhabditis elegans
Exon74327   107   II: 14198827-14198933 Caenorhabditis elegans
Exon74328   222   II: 14198988-14199209 Caenorhabditis elegans
Exon74329   79   II: 14199258-14199336 Caenorhabditis elegans
Exon74330   117   II: 14200308-14200424 Caenorhabditis elegans
Exon74331   60   II: 14200807-14200866 Caenorhabditis elegans
Exon74332   71   II: 14200924-14200994 Caenorhabditis elegans
Exon74333   124   II: 14201041-14201164 Caenorhabditis elegans
Exon74334   110   II: 14201627-14201736 Caenorhabditis elegans
Exon74335   101   II: 14201804-14201904 Caenorhabditis elegans
Exon74336   67   II: 14202041-14202107 Caenorhabditis elegans
Exon74337   193   II: 14203522-14203714 Caenorhabditis elegans
Exon74338   86   II: 14203792-14203877 Caenorhabditis elegans
Exon74339   156   II: 14204695-14204850 Caenorhabditis elegans
Exon74340   69   II: 14204951-14205019 Caenorhabditis elegans
Exon74341   107   II: 14205068-14205174 Caenorhabditis elegans
Exon74342   224   II: 14205237-14205460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.7.1 14198046 14205460 1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript