WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.9.1 Sequence Name  Y48B6A.9.1
Length (nt)  783   Chromosome Location  II: 14211418-14213315
Chromosome . Primary Identifier  II Chromosome Location . Start  14211418
Chromosome Location . End  14213315 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001992 hot-7 Y48B6A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.9 Y48B6A.9 549   II: 14211439-14211528

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.9.1 14211418 14213315 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74353   111   II: 14211418-14211528 Caenorhabditis elegans
Exon74354   154   II: 14212549-14212702 Caenorhabditis elegans
Exon74355   85   II: 14212748-14212832 Caenorhabditis elegans
Exon74356   433   II: 14212883-14213315 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.9.1 14211418 14213315 1

1 Sequence

Length
783

1 Sequence Ontology Term

Identifier Name Description
transcript