Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y48B6A.24 | Y48B6A.24 |
791
 |
II: 14218808-14220379 |
Other
46 Allele
| Public Name |
|---|
| gk963801 |
| gk963053 |
| gk962684 |
| WBVar02068426 |
| WBVar01265762 |
| gk393368 |
| gk809706 |
| gk830112 |
| gk685518 |
| gk806077 |
| gk739462 |
| gk664601 |
| gk747963 |
| gk809039 |
| gk522235 |
| gk873496 |
| gk775934 |
| gk645251 |
| gk747962 |
| gk402816 |
| gk515343 |
| gk747964 |
| WBVar00013628 |
| WBVar01994466 |
| WBVar00013633 |
| WBVar01944151 |
| WBVar02029640 |
| h16295 |
| WBVar01319604 |
| WBVar01252723 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00219620 | 14218808 | 14220379 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrII_14220380..14220938 | 559 | II: 14220380-14220938 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in 10-days post L4 adult hermaphrodite N2 grown at 20C, comparing to in 1-day post L4 adult hermaphrodite N2 animals grown at 20C. | CuffDiff, fold change > 2. | WBPaper00065096:Day10_vs_Day1_upregulated | |
| Bacteria infection: Bacillus thuringiensis | Transcripts that showed significantly decreased expression in N2 animals infected by bacteria BMB171/Cry5Ba, an acrystalliferous Bt mutant BMB171 transformed with toxin gene cry5Ba on the shuttle vector pHT304, comparing to N2 animals infected by BMB171/pHT304. | N.A. | WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated |
| Transcripts that showed significantly increased expression in ints-4(RNAi) animals treated with 300uM CdCl2 from L1 to late L3 larva stage, comparing to control RNAi animals with the same Cadmium treatment. | DESeq2, v1.12.0, fold change > 2, FDR < 0.05 | WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium |