WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.12.1 Sequence Name  Y48B6A.12.1
Length (nt)  2129   Chromosome Location  II: 14226377-14233855
Chromosome . Primary Identifier  II Chromosome Location . Start  14226377
Chromosome Location . End  14233855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012983 men-1 Y48B6A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.12 Y48B6A.12 1863   II: 14226591-14226728

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.12.1 14226377 14233855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74375   352   II: 14226377-14226728 Caenorhabditis elegans
Exon74376   333   II: 14228338-14228670 Caenorhabditis elegans
Exon74378   464   II: 14229904-14230367 Caenorhabditis elegans
Exon74380   902   II: 14231375-14232276 Caenorhabditis elegans
Exon74382   78   II: 14233778-14233855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.12.1 14226377 14233855 -1

1 Sequence

Length
2129

1 Sequence Ontology Term

Identifier Name Description
transcript