WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48B6A.11 Sequence Name  Y48B6A.11
Length (nt)  2769   Chromosome Location  II: 14235294-14235455
Chromosome . Primary Identifier  II Chromosome Location . Start  14235294
Chromosome Location . End  14235455
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41181 JMJD-2 105.6 922 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00056876
WBRNAi00113491
WBRNAi00037229
WBRNAi00091512
WBRNAi00091537
WBRNAi00061990
WBRNAi00091542

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48B6A.11 14235294 14235455 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012982 jmjd-2 Y48B6A.11 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48B6A.11 14235294 14235455 -1
CDS:Y48B6A.11 14236871 14237804 -1
CDS:Y48B6A.11 14238612 14238756 -1
CDS:Y48B6A.11 14239909 14240999 -1
CDS:Y48B6A.11 14241662 14241886 -1
CDS:Y48B6A.11 14243379 14243590 -1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48B6A.11.1 Y48B6A.11.1 3097   II: 14234979-14243603