WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G11A.13a Sequence Name  Y54G11A.13a
Length (nt)  1539   Chromosome Location  II: 14307854-14308375
Chromosome . Primary Identifier  II Chromosome Location . Start  14307854
Chromosome Location . End  14308375
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.13a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22478 CTL-3, isoform a 59.0 512 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00057425
WBRNAi00020988
WBRNAi00063176
WBRNAi00063177
WBRNAi00063178
WBRNAi00078268
WBRNAi00112317

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G11A.13a 14307854 14308375 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013220 ctl-3 Y54G11A.13 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G11A.13a 14307854 14308375 -1
CDS:Y54G11A.13a 14309389 14309661 -1
CDS:Y54G11A.13a 14309716 14310360 -1
CDS:Y54G11A.13a 14310421 14310488 -1
CDS:Y54G11A.13a 14310713 14310743 -1

1 Sequence

Length
1539

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G11A.13a.1 Y54G11A.13a.1 1631   II: 14307798-14310779