WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G11A.10b.1 Sequence Name  Y54G11A.10b.1
Length (nt)  951   Chromosome Location  II: 14347162-14349406
Chromosome . Primary Identifier  II Chromosome Location . Start  14347162
Chromosome Location . End  14349406 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002996 lin-7 Y54G11A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G11A.10b Y54G11A.10b 627   II: 14347162-14347356

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.10b.1 14347162 14349406 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74482   195   II: 14347162-14347356 Caenorhabditis elegans
Exon74484   73   II: 14347784-14347856 Caenorhabditis elegans
Exon74486   158   II: 14347916-14348073 Caenorhabditis elegans
Exon74488   201   II: 14348592-14348792 Caenorhabditis elegans
Exon74490   159   II: 14349037-14349195 Caenorhabditis elegans
Exon74491   165   II: 14349242-14349406 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.10b.1 14347162 14349406 -1

1 Sequence

Length
951

1 Sequence Ontology Term

Identifier Name Description
transcript