WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54G11A.10a Sequence Name  Y54G11A.10a
Length (nt)  630   Chromosome Location  II: 14347162-14347356
Chromosome . Primary Identifier  II Chromosome Location . Start  14347162
Chromosome Location . End  14347356
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43589 LIN-7, isoform a 22.9 209 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00009386
WBRNAi00067552
WBRNAi00067662
WBRNAi00067795
WBRNAi00067849
WBRNAi00067886
WBRNAi00068101
WBRNAi00057422
WBRNAi00071857
WBRNAi00071235
WBRNAi00026852
WBRNAi00110577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54G11A.10a 14347162 14347356 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002996 lin-7 Y54G11A.10 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54G11A.10a 14347162 14347356 -1
CDS:Y54G11A.10a 14347781 14347856 -1
CDS:Y54G11A.10a 14347916 14348073 -1
CDS:Y54G11A.10a 14348592 14348792 -1

1 Sequence

Length
630

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54G11A.10a.1 Y54G11A.10a.1 1948   II: 14345844-14348792