WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R06A4.8 Sequence Name  R06A4.8
Length (nt)  4404   Chromosome Location  II: 14350877-14351740
Chromosome . Primary Identifier  II Chromosome Location . Start  14350877
Chromosome Location . End  14351740
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06A4.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18115 AGL-1 165.9 1467 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051365
WBRNAi00034647
WBRNAi00017484

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R06A4.8 14350877 14351740 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011050 agl-1 R06A4.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R06A4.8 14350877 14351740 -1
CDS:R06A4.8 14352113 14352701 -1
CDS:R06A4.8 14353304 14353730 -1
CDS:R06A4.8 14353778 14354327 -1
CDS:R06A4.8 14354373 14354589 -1
CDS:R06A4.8 14355560 14355912 -1
CDS:R06A4.8 14355965 14356308 -1
CDS:R06A4.8 14356380 14356557 -1
CDS:R06A4.8 14356603 14357402 -1
CDS:R06A4.8 14357449 14357530 -1

1 Sequence

Length
4404

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R06A4.8.1 R06A4.8.1 4757   II: 14350713-14358113
Transcript:R06A4.8.2 R06A4.8.2 4608   II: 14350713-14357570