WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06A4.10a.1 Sequence Name  R06A4.10a.1
Length (nt)  1841   Chromosome Location  II: 14373831-14377890
Chromosome . Primary Identifier  II Chromosome Location . Start  14373831
Chromosome Location . End  14377890 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06A4.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000059 acr-20 R06A4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06A4.10a R06A4.10a 1545   II: 14373988-14374166

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06A4.10a.1 14373831 14377890 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74568   336   II: 14373831-14374166 Caenorhabditis elegans
Exon74571   177   II: 14374213-14374389 Caenorhabditis elegans
Exon74575   112   II: 14374439-14374550 Caenorhabditis elegans
Exon74577   418   II: 14374939-14375356 Caenorhabditis elegans
Exon74580   287   II: 14375823-14376109 Caenorhabditis elegans
Exon74583   154   II: 14376265-14376418 Caenorhabditis elegans
Exon74586   155   II: 14376472-14376626 Caenorhabditis elegans
Exon74589   122   II: 14376781-14376902 Caenorhabditis elegans
Exon74593   80   II: 14377811-14377890 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06A4.10a.1 14373831 14377890 -1

1 Sequence

Length
1841

1 Sequence Ontology Term

Identifier Name Description
transcript