WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26H11.2i.1 Sequence Name  F26H11.2i.1
Length (nt)  5116   Chromosome Location  II: 14390713-14401127
Chromosome . Primary Identifier  II Chromosome Location . Start  14390713
Chromosome Location . End  14401127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26H11.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009180 nurf-1 F26H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H11.2i F26H11.2i 4860   II: 14390720-14391012

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26H11.2i.1 14390713 14401127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74616   300   II: 14390713-14391012 Caenorhabditis elegans
Exon74629   657   II: 14391684-14392340 Caenorhabditis elegans
Exon74641   85   II: 14392439-14392523 Caenorhabditis elegans
Exon74654   263   II: 14392584-14392846 Caenorhabditis elegans
Exon74666   272   II: 14394227-14394498 Caenorhabditis elegans
Exon74679   322   II: 14394686-14395007 Caenorhabditis elegans
Exon74693   433   II: 14395322-14395754 Caenorhabditis elegans
Exon74707   225   II: 14395808-14396032 Caenorhabditis elegans
Exon74720   335   II: 14396075-14396409 Caenorhabditis elegans
Exon74740   132   II: 14397091-14397222 Caenorhabditis elegans
Exon74748   336   II: 14397686-14398021 Caenorhabditis elegans
Exon74761   328   II: 14398622-14398949 Caenorhabditis elegans
Exon74776   453   II: 14399048-14399500 Caenorhabditis elegans
Exon74794   474   II: 14400058-14400531 Caenorhabditis elegans
Exon74812   171   II: 14400581-14400751 Caenorhabditis elegans
Exon74833   330   II: 14400798-14401127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26H11.2i.1 14390713 14401127 1

1 Sequence

Length
5116

1 Sequence Ontology Term

Identifier Name Description
transcript