WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04B12.1.1 Sequence Name  K04B12.1.1
Length (nt)  5538   Chromosome Location  II: 14417855-14424891
Chromosome . Primary Identifier  II Chromosome Location . Start  14417855
Chromosome Location . End  14424891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04B12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004048 plx-2 K04B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04B12.1 K04B12.1 5358   II: 14418025-14418228

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04B12.1.1 14417855 14424891 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74968   374   II: 14417855-14418228 Caenorhabditis elegans
Exon74969   180   II: 14418274-14418453 Caenorhabditis elegans
Exon74970   467   II: 14418503-14418969 Caenorhabditis elegans
Exon74971   171   II: 14419019-14419189 Caenorhabditis elegans
Exon74972   157   II: 14419238-14419394 Caenorhabditis elegans
Exon74973   1917   II: 14420016-14421932 Caenorhabditis elegans
Exon74974   155   II: 14421982-14422136 Caenorhabditis elegans
Exon74975   658   II: 14422199-14422856 Caenorhabditis elegans
Exon74976   135   II: 14422901-14423035 Caenorhabditis elegans
Exon74977   135   II: 14423089-14423223 Caenorhabditis elegans
Exon74978   165   II: 14423432-14423596 Caenorhabditis elegans
Exon74979   259   II: 14423641-14423899 Caenorhabditis elegans
Exon74980   477   II: 14423948-14424424 Caenorhabditis elegans
Exon74981   128   II: 14424470-14424597 Caenorhabditis elegans
Exon74982   160   II: 14424732-14424891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04B12.1.1 14417855 14424891 -1

1 Sequence

Length
5538

1 Sequence Ontology Term

Identifier Name Description
transcript