WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B4.1e.1 Sequence Name  C13B4.1e.1
Length (nt)  3058   Chromosome Location  II: 14470371-14479633
Chromosome . Primary Identifier  II Chromosome Location . Start  14470371
Chromosome Location . End  14479633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B4.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007545 C13B4.1 C13B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B4.1e C13B4.1e 2889   II: 14470533-14470631

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B4.1e.1 14470371 14479633 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75032   261   II: 14470371-14470631 Caenorhabditis elegans
Exon75044   158   II: 14471659-14471816 Caenorhabditis elegans
Exon75049   253   II: 14471868-14472120 Caenorhabditis elegans
Exon75054   291   II: 14473059-14473349 Caenorhabditis elegans
Exon75058   307   II: 14473963-14474269 Caenorhabditis elegans
Exon75064   80   II: 14474966-14475045 Caenorhabditis elegans
Exon75069   921   II: 14475949-14476869 Caenorhabditis elegans
Exon75073   213   II: 14477326-14477538 Caenorhabditis elegans
Exon75077   225   II: 14478402-14478626 Caenorhabditis elegans
Exon75081   105   II: 14478692-14478796 Caenorhabditis elegans
Exon75085   244   II: 14479390-14479633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B4.1e.1 14470371 14479633 -1

1 Sequence

Length
3058

1 Sequence Ontology Term

Identifier Name Description
transcript