WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B4.1a.1 Sequence Name  C13B4.1a.1
Length (nt)  3190   Chromosome Location  II: 14470377-14479627
Chromosome . Primary Identifier  II Chromosome Location . Start  14470377
Chromosome Location . End  14479627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007545 C13B4.1 C13B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B4.1a C13B4.1a 3033   II: 14470533-14470631

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B4.1a.1 14470377 14479627 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75033   255   II: 14470377-14470631 Caenorhabditis elegans
Exon75036   144   II: 14470734-14470877 Caenorhabditis elegans
Exon75040   158   II: 14471659-14471816 Caenorhabditis elegans
Exon75046   253   II: 14471868-14472120 Caenorhabditis elegans
Exon75051   291   II: 14473059-14473349 Caenorhabditis elegans
Exon75055   307   II: 14473963-14474269 Caenorhabditis elegans
Exon75061   80   II: 14474966-14475045 Caenorhabditis elegans
Exon75066   921   II: 14475949-14476869 Caenorhabditis elegans
Exon75070   213   II: 14477326-14477538 Caenorhabditis elegans
Exon75074   225   II: 14478402-14478626 Caenorhabditis elegans
Exon75078   105   II: 14478692-14478796 Caenorhabditis elegans
Exon75084   238   II: 14479390-14479627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B4.1a.1 14470377 14479627 -1

1 Sequence

Length
3190

1 Sequence Ontology Term

Identifier Name Description
transcript