WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B4.1d.1 Sequence Name  C13B4.1d.1
Length (nt)  3078   Chromosome Location  II: 14470533-14479626
Chromosome . Primary Identifier  II Chromosome Location . Start  14470533
Chromosome Location . End  14479626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B4.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007545 C13B4.1 C13B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B4.1d C13B4.1d 3078   II: 14470533-14470631

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B4.1d.1 14470533 14479626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75035   99   II: 14470533-14470631 Caenorhabditis elegans
Exon75038   144   II: 14470734-14470877 Caenorhabditis elegans
Exon75043   158   II: 14471659-14471816 Caenorhabditis elegans
Exon75048   253   II: 14471868-14472120 Caenorhabditis elegans
Exon75053   291   II: 14473059-14473349 Caenorhabditis elegans
Exon75057   307   II: 14473963-14474269 Caenorhabditis elegans
Exon75063   80   II: 14474966-14475045 Caenorhabditis elegans
Exon75065   45   II: 14475227-14475271 Caenorhabditis elegans
Exon75068   921   II: 14475949-14476869 Caenorhabditis elegans
Exon75072   213   II: 14477326-14477538 Caenorhabditis elegans
Exon75076   225   II: 14478402-14478626 Caenorhabditis elegans
Exon75080   105   II: 14478692-14478796 Caenorhabditis elegans
Exon75083   237   II: 14479390-14479626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B4.1d.1 14470533 14479626 -1

1 Sequence

Length
3078

1 Sequence Ontology Term

Identifier Name Description
transcript