WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C2.2.1 Sequence Name  F57C2.2.1
Length (nt)  1002   Chromosome Location  II: 14520996-14522137
Chromosome . Primary Identifier  II Chromosome Location . Start  14520996
Chromosome Location . End  14522137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010194 btb-19 F57C2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C2.2 F57C2.2 900   II: 14521082-14521359

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57C2.2.1 14520996 14522137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75160   364   II: 14520996-14521359 Caenorhabditis elegans
Exon75162   151   II: 14521405-14521555 Caenorhabditis elegans
Exon75163   367   II: 14521603-14521969 Caenorhabditis elegans
Exon75164   120   II: 14522018-14522137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57C2.2.1 14520996 14522137 -1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
transcript