WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04H5.6a.1 Sequence Name  C04H5.6a.1
Length (nt)  3200   Chromosome Location  II: 14552504-14561599
Chromosome . Primary Identifier  II Chromosome Location . Start  14552504
Chromosome Location . End  14561599 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04H5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003392 mog-4 C04H5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04H5.6a C04H5.6a 3027   II: 14552674-14552751

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04H5.6a.1 14552504 14561599 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75243   248   II: 14552504-14552751 Caenorhabditis elegans
Exon75245   54   II: 14553227-14553280 Caenorhabditis elegans
Exon75247   128   II: 14555945-14556072 Caenorhabditis elegans
Exon75248   82   II: 14556595-14556676 Caenorhabditis elegans
Exon75249   220   II: 14556989-14557208 Caenorhabditis elegans
Exon75250   419   II: 14557633-14558051 Caenorhabditis elegans
Exon75251   141   II: 14558563-14558703 Caenorhabditis elegans
Exon75253   466   II: 14559352-14559817 Caenorhabditis elegans
Exon75254   116   II: 14559965-14560080 Caenorhabditis elegans
Exon75255   1326   II: 14560274-14561599 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04H5.6a.1 14552504 14561599 -1

1 Sequence

Length
3200

1 Sequence Ontology Term

Identifier Name Description
transcript