WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19H8.2.2 Sequence Name  F19H8.2.2
Length (nt)  1159   Chromosome Location  II: 14604139-14605869
Chromosome . Primary Identifier  II Chromosome Location . Start  14604139
Chromosome Location . End  14605869 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19H8.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008963 pugs-2 F19H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19H8.2 F19H8.2 912   II: 14604206-14604514

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19H8.2.2 14604139 14605869 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75320   376   II: 14604139-14604514 Caenorhabditis elegans
Exon75323   162   II: 14604594-14604755 Caenorhabditis elegans
Exon75325   153   II: 14604963-14605115 Caenorhabditis elegans
Exon75327   208   II: 14605161-14605368 Caenorhabditis elegans
Exon75328   135   II: 14605539-14605673 Caenorhabditis elegans
Exon75330   125   II: 14605745-14605869 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19H8.2.2 14604139 14605869 -1

1 Sequence

Length
1159

1 Sequence Ontology Term

Identifier Name Description
transcript