WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C6.4.1 Sequence Name  C38C6.4.1
Length (nt)  1169   Chromosome Location  II: 14634567-14636837
Chromosome . Primary Identifier  II Chromosome Location . Start  14634567
Chromosome Location . End  14636837 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007997 sre-13 C38C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C6.4 C38C6.4 1080   II: 14634656-14634905

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38C6.4.1 14634567 14636837 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75385   339   II: 14634567-14634905 Caenorhabditis elegans
Exon75386   134   II: 14634953-14635086 Caenorhabditis elegans
Exon75387   179   II: 14635137-14635315 Caenorhabditis elegans
Exon75390   219   II: 14635491-14635709 Caenorhabditis elegans
Exon75392   158   II: 14636492-14636649 Caenorhabditis elegans
Exon75393   140   II: 14636698-14636837 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38C6.4.1 14634567 14636837 -1

1 Sequence

Length
1169

1 Sequence Ontology Term

Identifier Name Description
transcript