WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2d.1 Sequence Name  ZC101.2d.1
Length (nt)  12546   Chromosome Location  II: 14647321-14684456
Chromosome . Primary Identifier  II Chromosome Location . Start  14647321
Chromosome Location . End  14684456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2d ZC101.2d 12228   II: 14647479-14647857

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2d.1 14647321 14684456 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

44 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75418   537   II: 14647321-14647857 Caenorhabditis elegans
Exon75421   223   II: 14647920-14648142 Caenorhabditis elegans
Exon75424   276   II: 14648552-14648827 Caenorhabditis elegans
Exon75427   550   II: 14648886-14649435 Caenorhabditis elegans
Exon75430   113   II: 14649495-14649607 Caenorhabditis elegans
Exon75433   148   II: 14649651-14649798 Caenorhabditis elegans
Exon75436   170   II: 14649844-14650013 Caenorhabditis elegans
Exon75439   219   II: 14650061-14650279 Caenorhabditis elegans
Exon75442   213   II: 14650326-14650538 Caenorhabditis elegans
Exon75445   305   II: 14650594-14650898 Caenorhabditis elegans
Exon75449   208   II: 14651003-14651210 Caenorhabditis elegans
Exon75464   127   II: 14652683-14652809 Caenorhabditis elegans
Exon75468   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75483   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75496   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75509   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75522   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75534   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75545   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75555   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75565   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75578   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75591   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75624   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75638   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75652   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75666   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75680   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75690   12   II: 14664402-14664413 Caenorhabditis elegans
Exon75694   346   II: 14664632-14664977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2d.1 14647321 14684456 -1

1 Sequence

Length
12546

1 Sequence Ontology Term

Identifier Name Description
transcript