WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2a.1 Sequence Name  ZC101.2a.1
Length (nt)  7968   Chromosome Location  II: 14652130-14666943
Chromosome . Primary Identifier  II Chromosome Location . Start  14652130
Chromosome Location . End  14666943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2a ZC101.2a 7449   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2a.1 14652130 14666943 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75452   680   II: 14652130-14652809 Caenorhabditis elegans
Exon75466   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75481   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75494   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75507   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75520   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75533   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75544   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75553   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75563   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75576   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75589   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75601   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75611   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75622   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75635   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75649   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75663   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75677   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75691   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75705   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75719   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75733   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75755   185   II: 14666759-14666943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2a.1 14652130 14666943 -1

1 Sequence

Length
7968

1 Sequence Ontology Term

Identifier Name Description
transcript