WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2m.1 Sequence Name  ZC101.2m.1
Length (nt)  7567   Chromosome Location  II: 14652143-14666852
Chromosome . Primary Identifier  II Chromosome Location . Start  14652143
Chromosome Location . End  14666852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2m ZC101.2m 7152   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2m.1 14652143 14666852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75454   667   II: 14652143-14652809 Caenorhabditis elegans
Exon75475   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75490   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75503   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75516   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75529   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75540   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75550   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75572   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75585   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75597   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75607   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75617   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75631   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75645   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75659   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75673   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75686   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75701   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75715   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75729   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75743   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75750   94   II: 14666759-14666852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2m.1 14652143 14666852 -1

1 Sequence

Length
7567

1 Sequence Ontology Term

Identifier Name Description
transcript