WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2c.1 Sequence Name  ZC101.2c.1
Length (nt)  7393   Chromosome Location  II: 14652143-14666942
Chromosome . Primary Identifier  II Chromosome Location . Start  14652143
Chromosome Location . End  14666942 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2c ZC101.2c 6888   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2c.1 14652143 14666942 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75457   667   II: 14652143-14652809 Caenorhabditis elegans
Exon75467   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75482   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75495   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75508   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75521   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75554   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75564   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75577   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75590   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75602   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75612   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75623   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75637   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75651   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75665   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75679   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75693   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75707   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75721   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75735   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75753   184   II: 14666759-14666942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2c.1 14652143 14666942 -1

1 Sequence

Length
7393

1 Sequence Ontology Term

Identifier Name Description
transcript