WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC101.2r.1 Sequence Name  ZC101.2r.1
Length (nt)  9816   Chromosome Location  II: 14652558-14684296
Chromosome . Primary Identifier  II Chromosome Location . Start  14652558
Chromosome Location . End  14684296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC101.2r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2r ZC101.2r 9816   II: 14652558-14652809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2r.1 14652558 14684296 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

34 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75463   252   II: 14652558-14652809 Caenorhabditis elegans
Exon75479   155   II: 14653661-14653815 Caenorhabditis elegans
Exon75493   240   II: 14654219-14654458 Caenorhabditis elegans
Exon75505   207   II: 14654571-14654777 Caenorhabditis elegans
Exon75519   181   II: 14656090-14656270 Caenorhabditis elegans
Exon75532   770   II: 14656328-14657097 Caenorhabditis elegans
Exon75543   279   II: 14657213-14657491 Caenorhabditis elegans
Exon75552   282   II: 14657638-14657919 Caenorhabditis elegans
Exon75562   297   II: 14658038-14658334 Caenorhabditis elegans
Exon75575   279   II: 14658475-14658753 Caenorhabditis elegans
Exon75588   564   II: 14658804-14659367 Caenorhabditis elegans
Exon75600   279   II: 14659535-14659813 Caenorhabditis elegans
Exon75610   190   II: 14659964-14660153 Caenorhabditis elegans
Exon75620   89   II: 14661026-14661114 Caenorhabditis elegans
Exon75634   194   II: 14661744-14661937 Caenorhabditis elegans
Exon75648   612   II: 14662038-14662649 Caenorhabditis elegans
Exon75662   89   II: 14662697-14662785 Caenorhabditis elegans
Exon75676   273   II: 14662833-14663105 Caenorhabditis elegans
Exon75689   867   II: 14663345-14664211 Caenorhabditis elegans
Exon75704   346   II: 14664632-14664977 Caenorhabditis elegans
Exon75718   331   II: 14665646-14665976 Caenorhabditis elegans
Exon75732   273   II: 14666057-14666329 Caenorhabditis elegans
Exon75746   306   II: 14666388-14666693 Caenorhabditis elegans
Exon75760   161   II: 14675475-14675635 Caenorhabditis elegans
Exon75762   502   II: 14675916-14676417 Caenorhabditis elegans
Exon75764   447   II: 14676526-14676972 Caenorhabditis elegans
Exon75766   129   II: 14677659-14677787 Caenorhabditis elegans
Exon75776   181   II: 14681143-14681323 Caenorhabditis elegans
Exon75778   110   II: 14681693-14681802 Caenorhabditis elegans
Exon75780   151   II: 14682191-14682341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC101.2r.1 14652558 14684296 -1

1 Sequence

Length
9816

1 Sequence Ontology Term

Identifier Name Description
transcript