WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F9.3b.1 Sequence Name  C09F9.3b.1
Length (nt)  2689   Chromosome Location  II: 14720285-14728016
Chromosome . Primary Identifier  II Chromosome Location . Start  14720285
Chromosome Location . End  14728016 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007480 glna-1 C09F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F9.3b C09F9.3b 2382   II: 14721349-14721749

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3b.1 14720285 14728016 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75852   307   II: 14720285-14720591 Caenorhabditis elegans
Exon75858   401   II: 14721349-14721749 Caenorhabditis elegans
Exon75867   125   II: 14722129-14722253 Caenorhabditis elegans
Exon75874   153   II: 14722303-14722455 Caenorhabditis elegans
Exon75881   185   II: 14722708-14722892 Caenorhabditis elegans
Exon75888   249   II: 14723222-14723470 Caenorhabditis elegans
Exon75895   210   II: 14723600-14723809 Caenorhabditis elegans
Exon75901   106   II: 14724840-14724945 Caenorhabditis elegans
Exon75910   151   II: 14725167-14725317 Caenorhabditis elegans
Exon75917   374   II: 14725490-14725863 Caenorhabditis elegans
Exon75924   307   II: 14727198-14727504 Caenorhabditis elegans
Exon75929   121   II: 14727896-14728016 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3b.1 14720285 14728016 -1

1 Sequence

Length
2689

1 Sequence Ontology Term

Identifier Name Description
transcript