WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F9.3f.1 Sequence Name  C09F9.3f.1
Length (nt)  2571   Chromosome Location  II: 14720552-14733524
Chromosome . Primary Identifier  II Chromosome Location . Start  14720552
Chromosome Location . End  14733524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F9.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007480 glna-1 C09F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F9.3f C09F9.3f 2571   II: 14720552-14720591

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3f.1 14720552 14733524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75854   40   II: 14720552-14720591 Caenorhabditis elegans
Exon75857   53   II: 14720732-14720784 Caenorhabditis elegans
Exon75864   353   II: 14721397-14721749 Caenorhabditis elegans
Exon75871   125   II: 14722129-14722253 Caenorhabditis elegans
Exon75878   153   II: 14722303-14722455 Caenorhabditis elegans
Exon75885   185   II: 14722708-14722892 Caenorhabditis elegans
Exon75892   249   II: 14723222-14723470 Caenorhabditis elegans
Exon75899   210   II: 14723600-14723809 Caenorhabditis elegans
Exon75905   106   II: 14724840-14724945 Caenorhabditis elegans
Exon75914   151   II: 14725167-14725317 Caenorhabditis elegans
Exon75921   374   II: 14725490-14725863 Caenorhabditis elegans
Exon75928   307   II: 14727198-14727504 Caenorhabditis elegans
Exon75935   154   II: 14727896-14728049 Caenorhabditis elegans
Exon75939   111   II: 14733414-14733524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3f.1 14720552 14733524 -1

1 Sequence

Length
2571

1 Sequence Ontology Term

Identifier Name Description
transcript