WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F9.3a.2 Sequence Name  C09F9.3a.2
Length (nt)  2509   Chromosome Location  II: 14721349-14733513
Chromosome . Primary Identifier  II Chromosome Location . Start  14721349
Chromosome Location . End  14733513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F9.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007480 glna-1 C09F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F9.3a C09F9.3a 2376   II: 14721349-14721749

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3a.2 14721349 14733513 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75860   401   II: 14721349-14721749 Caenorhabditis elegans
Exon75866   125   II: 14722129-14722253 Caenorhabditis elegans
Exon75873   153   II: 14722303-14722455 Caenorhabditis elegans
Exon75880   185   II: 14722708-14722892 Caenorhabditis elegans
Exon75887   249   II: 14723222-14723470 Caenorhabditis elegans
Exon75894   210   II: 14723600-14723809 Caenorhabditis elegans
Exon75907   100   II: 14724846-14724945 Caenorhabditis elegans
Exon75909   151   II: 14725167-14725317 Caenorhabditis elegans
Exon75916   374   II: 14725490-14725863 Caenorhabditis elegans
Exon75923   307   II: 14727198-14727504 Caenorhabditis elegans
Exon75932   154   II: 14727896-14728049 Caenorhabditis elegans
Exon75936   100   II: 14733414-14733513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3a.2 14721349 14733513 -1

1 Sequence

Length
2509

1 Sequence Ontology Term

Identifier Name Description
transcript