WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F9.3d.1 Sequence Name  C09F9.3d.1
Length (nt)  2526   Chromosome Location  II: 14721349-14733524
Chromosome . Primary Identifier  II Chromosome Location . Start  14721349
Chromosome Location . End  14733524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F9.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007480 glna-1 C09F9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F9.3d C09F9.3d 2526   II: 14721349-14721749

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3d.1 14721349 14733524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75868   401   II: 14721349-14721749 Caenorhabditis elegans
Exon75876   125   II: 14722129-14722253 Caenorhabditis elegans
Exon75883   153   II: 14722303-14722455 Caenorhabditis elegans
Exon75890   185   II: 14722708-14722892 Caenorhabditis elegans
Exon75897   249   II: 14723222-14723470 Caenorhabditis elegans
Exon75904   210   II: 14723600-14723809 Caenorhabditis elegans
Exon75910   106   II: 14724840-14724945 Caenorhabditis elegans
Exon75919   151   II: 14725167-14725317 Caenorhabditis elegans
Exon75926   374   II: 14725490-14725863 Caenorhabditis elegans
Exon75933   307   II: 14727198-14727504 Caenorhabditis elegans
Exon75940   154   II: 14727896-14728049 Caenorhabditis elegans
Exon75944   111   II: 14733414-14733524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F9.3d.1 14721349 14733524 -1

1 Sequence

Length
2526

1 Sequence Ontology Term

Identifier Name Description
transcript