WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.4b.1 Sequence Name  Y54E2A.4b.1
Length (nt)  3900   Chromosome Location  II: 14768462-14777737
Chromosome . Primary Identifier  II Chromosome Location . Start  14768462
Chromosome Location . End  14777737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013189 Y54E2A.4 Y54E2A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.4b Y54E2A.4b 3900   II: 14768462-14768742

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.4b.1 14768462 14777737 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75987   281   II: 14768462-14768742 Caenorhabditis elegans
Exon75989   511   II: 14769625-14770135 Caenorhabditis elegans
Exon75991   1666   II: 14770197-14771862 Caenorhabditis elegans
Exon75996   814   II: 14773764-14774577 Caenorhabditis elegans
Exon75999   373   II: 14775296-14775668 Caenorhabditis elegans
Exon76002   167   II: 14776529-14776695 Caenorhabditis elegans
Exon76004   88   II: 14777650-14777737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.4b.1 14768462 14777737 1

1 Sequence

Length
3900

1 Sequence Ontology Term

Identifier Name Description
transcript