WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.8b.1 Sequence Name  Y54E2A.8b.1
Length (nt)  819   Chromosome Location  II: 14780040-14782537
Chromosome . Primary Identifier  II Chromosome Location . Start  14780040
Chromosome Location . End  14782537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013193 Y54E2A.8 Y54E2A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.8b Y54E2A.8b 819   II: 14780040-14780469

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.8b.1 14780040 14782537 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76012   430   II: 14780040-14780469 Caenorhabditis elegans
Exon76014   180   II: 14781175-14781354 Caenorhabditis elegans
Exon76016   107   II: 14782282-14782388 Caenorhabditis elegans
Exon76017   102   II: 14782436-14782537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.8b.1 14780040 14782537 1

1 Sequence

Length
819

1 Sequence Ontology Term

Identifier Name Description
transcript