WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.10.1 Sequence Name  Y54E2A.10.1
Length (nt)  1077   Chromosome Location  II: 14791051-14792655
Chromosome . Primary Identifier  II Chromosome Location . Start  14791051
Chromosome Location . End  14792655 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013195 Y54E2A.10 Y54E2A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.10 Y54E2A.10 918   II: 14791109-14791161

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.10.1 14791051 14792655 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76024   111   II: 14791051-14791161 Caenorhabditis elegans
Exon76025   106   II: 14791210-14791315 Caenorhabditis elegans
Exon76026   259   II: 14791359-14791617 Caenorhabditis elegans
Exon76027   88   II: 14791908-14791995 Caenorhabditis elegans
Exon76028   127   II: 14792049-14792175 Caenorhabditis elegans
Exon76029   111   II: 14792225-14792335 Caenorhabditis elegans
Exon76030   275   II: 14792381-14792655 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E2A.10.1 14791051 14792655 1

1 Sequence

Length
1077

1 Sequence Ontology Term

Identifier Name Description
transcript